3 April 2017
Forschungszentrum Juelich
Europe/Berlin timezone

SMHB working meeting, 3. April 2017
(FZ Juelich, JSC, Rotunde)

09.00 - 09.10

Opening address by Katrin Amunts (INM-1)

Plenary Session I (09.10 - 10.30)

chaired by Abigail Morrison (INM-6)

09.10 - 10.10

Software Maturity in the SMHB

  • Introduction by Benjamin Weyers (RWTH)

  • Assessing Software Development Maturity in the SMHB by Guido Trensch (JSC/SL Neuroscience)

10.10 - 10.30

Registration of 3D PLI Data of the Human Brain by Sharib Ali (DKFZ)

10.30 - 11.00

Coffee break

Plenary Session II (11.00 - 12.20)

chaired by Boris Orth (JSC)

11.00- 12.00

HBP Pilot Systems

  • Overview of the systems by Bastian Tweddell (JSC)

  • Independent Component Analysis on PLI data on JURON by Carlos Gonzalez (INM-1)

  • NestMC on JULIA and JURON by Alex Peyser (JSC/SL Neuroscience)

  • The Virtual Brain on JURON by Sandra Diaz Pier (JSC/SL Neuroscience)

12.00 - 12.20

Update on T4.2 “Data Management” by André Giesler (JSC)

12.20 - 13:30

Group photo/ Lunch in the foyer of the Rotunde

13.30 - 14.30

The future of SMHB

chaired by Katrin Amunts (INM-1) and Thomas Lippert (JSC)

Working groups (14.30 - 17.00)*

14.30 - 15.30

Profiling C++ and Python applications on HPC systems chaired by Jakob Jordan (INM-6)


Jakob Jordan (INM-6)
Carlos Canova (INM-6)
Wouter Klijn (JSC/SL Neuroscience)
Salem El Sayed (JSC)
Michael Knobloch (JSC)

Visualization for fiber data

chaired by Benjamin Weyers (RWTH)

Data management and storage for in-vivo and microscopy imaging

chaired by Timo Dickscheid (INM-1)

15.30 - 16.00

Coffee break

16.00 - 17.00

Profiling C++ and Python applications on HPC


Image registration

chaired by Markus Axer (INM-1)

*Please feel welcome to stay on for discussions after the meeting - all rooms are booked until 18.00.